STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GKG7_PHYRMWD_REPEATS_REGION domain-containing protein. (554 aa)    
Predicted Functional Partners:
H3GGQ6_PHYRM
WD_REPEATS_REGION domain-containing protein.
   
 0.994
H3GRQ7_PHYRM
WD_REPEATS_REGION domain-containing protein.
   
 0.994
H3GU36_PHYRM
Uncharacterized protein.
   
 0.993
H3H2A5_PHYRM
WD_REPEATS_REGION domain-containing protein.
   
 0.993
H3GM34_PHYRM
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
 0.992
H3GN45_PHYRM
Uncharacterized protein.
   
 0.992
H3HC64_PHYRM
WD_REPEATS_REGION domain-containing protein.
   
 0.992
H3G5Z0_PHYRM
Nop domain-containing protein.
   
 0.991
H3G884_PHYRM
Brix domain-containing protein.
   
  0.990
H3GA67_PHYRM
WD_REPEATS_REGION domain-containing protein.
   
 0.990
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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