H3GLJ7_PHYRM protein (Phytophthora ramorum) - STRING interaction network

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second shell of interactors

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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protein homology

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[Homology]

Score

H3GLJ7_PHYRM

CCHC-type domain-containing protein. (231 aa)

Predicted Functional Partners:

H3G6N5_PHYRM

0.769

H3GQK6_PHYRM

0.529

H3H7I3_PHYRM

0.528

H3HAI4_PHYRM

0.526

H3GG05_PHYRM

0.484

H3H9D4_PHYRM

0.474

H3H8S3_PHYRM

0.467

H3H4N9_PHYRM

0.456

H3H4S4_PHYRM

0.454

H3H912_PHYRM

0.440

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G6N5_PHYRM	H3GLJ7_PHYRM	H3G6N5	H3GLJ7	Uncharacterized protein.	CCHC-type domain-containing protein.	0.769
H3G6N5_PHYRM	H3H4N9_PHYRM	H3G6N5	H3H4N9	Uncharacterized protein.	CCHC-type domain-containing protein.	0.769
H3G6N5_PHYRM	H3H4S4_PHYRM	H3G6N5	H3H4S4	Uncharacterized protein.	CCHC-type domain-containing protein.	0.769
H3G6N5_PHYRM	H3H912_PHYRM	H3G6N5	H3H912	Uncharacterized protein.	CCHC-type domain-containing protein.	0.769
H3GG05_PHYRM	H3GLJ7_PHYRM	H3GG05	H3GLJ7	Uncharacterized protein.	CCHC-type domain-containing protein.	0.484
H3GG05_PHYRM	H3H9D4_PHYRM	H3GG05	H3H9D4	Uncharacterized protein.	CCHC-type domain-containing protein.	0.402
H3GLJ7_PHYRM	H3G6N5_PHYRM	H3GLJ7	H3G6N5	CCHC-type domain-containing protein.	Uncharacterized protein.	0.769
H3GLJ7_PHYRM	H3GG05_PHYRM	H3GLJ7	H3GG05	CCHC-type domain-containing protein.	Uncharacterized protein.	0.484
H3GLJ7_PHYRM	H3GQK6_PHYRM	H3GLJ7	H3GQK6	CCHC-type domain-containing protein.	Uncharacterized protein.	0.529
H3GLJ7_PHYRM	H3H4N9_PHYRM	H3GLJ7	H3H4N9	CCHC-type domain-containing protein.	CCHC-type domain-containing protein.	0.456
H3GLJ7_PHYRM	H3H4S4_PHYRM	H3GLJ7	H3H4S4	CCHC-type domain-containing protein.	CCHC-type domain-containing protein.	0.454
H3GLJ7_PHYRM	H3H7I3_PHYRM	H3GLJ7	H3H7I3	CCHC-type domain-containing protein.	DUF4219 domain-containing protein.	0.528
H3GLJ7_PHYRM	H3H8S3_PHYRM	H3GLJ7	H3H8S3	CCHC-type domain-containing protein.	CCHC-type domain-containing protein.	0.467
H3GLJ7_PHYRM	H3H912_PHYRM	H3GLJ7	H3H912	CCHC-type domain-containing protein.	CCHC-type domain-containing protein.	0.440
H3GLJ7_PHYRM	H3H9D4_PHYRM	H3GLJ7	H3H9D4	CCHC-type domain-containing protein.	CCHC-type domain-containing protein.	0.474
H3GLJ7_PHYRM	H3HAI4_PHYRM	H3GLJ7	H3HAI4	CCHC-type domain-containing protein.	DUF4219 domain-containing protein.	0.526
H3GQK6_PHYRM	H3GLJ7_PHYRM	H3GQK6	H3GLJ7	Uncharacterized protein.	CCHC-type domain-containing protein.	0.529
H3GQK6_PHYRM	H3H8S3_PHYRM	H3GQK6	H3H8S3	Uncharacterized protein.	CCHC-type domain-containing protein.	0.514
H3H4N9_PHYRM	H3G6N5_PHYRM	H3H4N9	H3G6N5	CCHC-type domain-containing protein.	Uncharacterized protein.	0.769
H3H4N9_PHYRM	H3GLJ7_PHYRM	H3H4N9	H3GLJ7	CCHC-type domain-containing protein.	CCHC-type domain-containing protein.	0.456

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Network Stats

number of nodes:

5

number of edges:

9

average node degree:

3.6

avg. local clustering coefficient:

0.9

expected number of edges:

4

PPI enrichment p-value:

0.019

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:3975

Phospholipase D-like domain, and Phospholipid metabolism

4 of 5

2.79

4.96

5.97e-08

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

aka00564

Glycerophospholipid metabolism

4 of 16

2.29

4.07

2.85e-07

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0005576

Extracellular region

3 of 56

1.62

1.19

0.0090

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0677

Repeat

3 of 15

2.19

2.44

0.00017

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF13396

Phospholipase_D-nuclease N-terminal

2 of 2

2.89

1.71

0.0041

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR025202

Phospholipase D-like domain

3 of 3

2.89

3.22

2.73e-05

IPR001736

Phospholipase D/Transphosphatidylase

3 of 3

2.89

3.22

2.73e-05

IPR027379

Cardiolipin synthase N-terminal

2 of 2

2.89

1.76

0.0035

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00155

Phospholipase D. Active site motifs.

3 of 3

2.89

4.04

1.73e-06

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