STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GLK4_PHYRMMoCF_biosynth domain-containing protein. (265 aa)    
Predicted Functional Partners:
H3G5L7_PHYRM
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
  
 0.948
H3GR72_PHYRM
Uncharacterized protein.
  
 0.948
H3GWL8_PHYRM
Flavodoxin-like domain-containing protein.
  
 
 0.924
H3GAA3_PHYRM
Flavokinase domain-containing protein.
    
 0.903
H3G914_PHYRM
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 0.896
H3H0M0_PHYRM
Uncharacterized protein.
   
 0.896
H3GS81_PHYRM
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
 
   
 0.838
H3G7L2_PHYRM
Uncharacterized protein.
  
 
 0.769
H3G950_PHYRM
Uncharacterized protein.
  
 
 0.769
H3GWL4_PHYRM
FAD-binding FR-type domain-containing protein.
  
 
 0.769
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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