STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GMI9_PHYRMUncharacterized protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (551 aa)    
Predicted Functional Partners:
H3H0L8_PHYRM
ATG13 domain-containing protein.
   
 0.840
H3GE53_PHYRM
Uncharacterized protein.
    
 0.837
H3GTK1_PHYRM
Uncharacterized protein.
    
 0.539
H3H7P1_PHYRM
Carrier domain-containing protein.
     
 0.510
H3HBC7_PHYRM
Carrier domain-containing protein.
     
 0.510
H3GMY0_PHYRM
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.507
H3H8T9_PHYRM
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.507
H3GAC7_PHYRM
DLH domain-containing protein.
   
 0.490
H3GBJ1_PHYRM
BTB domain-containing protein.
   
 0.490
H3GPA7_PHYRM
Uncharacterized protein.
   
 0.490
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.