STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GPT6_PHYRMUncharacterized protein. (293 aa)    
Predicted Functional Partners:
H3H7W0_PHYRM
WD_REPEATS_REGION domain-containing protein.
    
 0.714
H3H2U3_PHYRM
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.
    
 0.713
H3GWL6_PHYRM
Uncharacterized protein.
    
 0.700
H3G7Q3_PHYRM
Tubulin_C domain-containing protein; Belongs to the tubulin family.
    
 0.671
H3GAD7_PHYRM
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.671
H3HAQ6_PHYRM
Tubulin domain-containing protein; Belongs to the tubulin family.
    
 0.671
H3GJP3_PHYRM
CAP-Gly domain-containing protein.
   
 0.658
H3HCI1_PHYRM
CAP-Gly domain-containing protein.
   
 0.658
H3GCL5_PHYRM
Uncharacterized protein.
    
 0.635
H3HED2_PHYRM
Uncharacterized protein.
    
 0.629
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.