STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GQU9_PHYRMUncharacterized protein; Belongs to the peptidase C19 family. (1389 aa)    
Predicted Functional Partners:
H3GBE1_PHYRM
Uncharacterized protein.
    
 0.611
H3GBM5_PHYRM
Enkurin domain-containing protein.
    
 0.611
H3GCI4_PHYRM
Uncharacterized protein.
    
 0.611
H3GVI4_PHYRM
Uncharacterized protein.
    
 0.611
H3GYJ5_PHYRM
HECT domain-containing protein.
   
  
 0.576
H3HC07_PHYRM
HECT domain-containing protein.
   
  
 0.576
H3GQY1_PHYRM
LysM domain-containing protein.
    
 
 0.567
H3HAU9_PHYRM
Uncharacterized protein.
    
 
 0.567
H3GCV5_PHYRM
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
    0.497
H3GQB2_PHYRM
Uncharacterized protein.
   
    0.456
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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