STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GRB5_PHYRMDRTGG domain-containing protein. (376 aa)    
Predicted Functional Partners:
H3G8X1_PHYRM
Malate synthase; Belongs to the malate synthase family.
     
 0.874
H3G9J1_PHYRM
Acetolactate synthase.
    
 0.727
H3G8P0_PHYRM
Uncharacterized protein.
     
 0.703
H3GL10_PHYRM
Fe-ADH domain-containing protein.
     
 0.703
H3GQH2_PHYRM
Radical_SAM domain-containing protein.
    
 0.700
H3G951_PHYRM
Citrate synthase; Belongs to the citrate synthase family.
     
 0.688
H3G9H1_PHYRM
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
     
 0.661
H3G957_PHYRM
Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
     
 0.650
H3G712_PHYRM
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.648
H3G8E1_PHYRM
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.648
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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