STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GRY8_PHYRMUncharacterized protein. (941 aa)    
Predicted Functional Partners:
H3G5W3_PHYRM
Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family.
    
   0.497
H3GAH1_PHYRM
Glutamine synthetase.
     
 0.490
H3GAH2_PHYRM
Glutamine synthetase.
     
 0.490
H3GAK0_PHYRM
Uncharacterized protein.
    
 0.484
H3GC25_PHYRM
Uncharacterized protein.
  
 
 0.476
H3GC28_PHYRM
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 
 0.476
H3GKB4_PHYRM
Uncharacterized protein.
    
  0.466
H3GKU5_PHYRM
Uncharacterized protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
    
  0.463
H3G8X5_PHYRM
Ras-like proteinRas-related protein Ypt1.
   
   0.451
H3GC27_PHYRM
Uncharacterized protein.
   
   0.451
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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