STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GSB4_PHYRMPeptidase_M22 domain-containing protein. (296 aa)    
Predicted Functional Partners:
H3GE49_PHYRM
Uncharacterized protein; Belongs to the CGI121/TPRKB family.
    
 0.973
H3GJN2_PHYRM
Protein kinase domain-containing protein.
   
 0.918
H3HA61_PHYRM
Protein kinase domain-containing protein.
   
 0.918
H3GAE3_PHYRM
Threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
  
 
 0.778
H3G8C2_PHYRM
MTS domain-containing protein.
   
 0.656
H3HEE6_PHYRM
Uncharacterized protein.
    
 0.646
H3G990_PHYRM
LMWPc domain-containing protein.
    
  0.580
H3GIZ6_PHYRM
LMWPc domain-containing protein.
    
  0.580
H3GAA3_PHYRM
Flavokinase domain-containing protein.
  
 
  0.553
H3H3C1_PHYRM
ATP-grasp domain-containing protein.
  
    0.537
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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