STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GSF0_PHYRMFAA_hydrolase domain-containing protein. (308 aa)    
Predicted Functional Partners:
H3G8D2_PHYRM
Uncharacterized protein.
  
 
 0.868
H3G601_PHYRM
General transcription factor IIH subunit.
 
      0.742
H3G893_PHYRM
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 0.716
H3G8X1_PHYRM
Malate synthase; Belongs to the malate synthase family.
    
 0.694
H3G9K7_PHYRM
Uncharacterized protein.
   
 0.688
H3GAU7_PHYRM
Fumarylacetoacetase.
     
 0.687
H3G5S9_PHYRM
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 0.643
H3G616_PHYRM
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 0.643
H3G711_PHYRM
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 0.643
H3G7V0_PHYRM
Aldedh domain-containing protein.
   
 0.643
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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