STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GSI5_PHYRMUncharacterized protein. (1126 aa)    
Predicted Functional Partners:
H3GW58_PHYRM
Diacylglycerol kinase.
     
 0.737
H3GI53_PHYRM
Uncharacterized protein.
     
 0.727
H3GZ56_PHYRM
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.
   
 0.722
H3G8V9_PHYRM
PALP domain-containing protein.
    
  0.706
H3GBC6_PHYRM
Uncharacterized protein; Belongs to the TrpA family.
    
  0.706
H3HC72_PHYRM
Uncharacterized protein.
    
 0.681
H3GFE6_PHYRM
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.677
H3GTS8_PHYRM
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.677
H3GJS7_PHYRM
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
     
 0.671
H3GQS6_PHYRM
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
     
 0.671
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.