STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GSN4_PHYRMUncharacterized protein. (433 aa)    
Predicted Functional Partners:
H3GAU6_PHYRM
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.577
H3GA17_PHYRM
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.521
H3G926_PHYRM
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
  0.518
H3GAM0_PHYRM
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.498
H3GM95_PHYRM
Uncharacterized protein.
    
  0.463
H3HC67_PHYRM
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
  0.463
H3GNT3_PHYRM
Uncharacterized protein.
     
 0.455
CES4
Cellulose synthase 4.
    
 0.453
H3GM50_PHYRM
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.453
H3GXG5_PHYRM
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.453
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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