STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GT45_PHYRMUncharacterized protein. (285 aa)    
Predicted Functional Partners:
H3G6G2_PHYRM
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
  
 0.904
H3GB26_PHYRM
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
  
 0.904
H3GMY4_PHYRM
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
  
 0.904
H3G5S1_PHYRM
Methyltransf_11 domain-containing protein.
   
 0.890
H3G912_PHYRM
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 0.879
H3GPA8_PHYRM
Uncharacterized protein.
  
 0.879
H3HB70_PHYRM
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 0.879
H3GV87_PHYRM
Nudix hydrolase domain-containing protein.
  
 
 0.867
H3G836_PHYRM
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
   
 
 0.839
H3GQ87_PHYRM
Uncharacterized protein.
     
 0.776
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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