STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GTZ2_PHYRMPhosphodiesterase. (873 aa)    
Predicted Functional Partners:
H3GAI3_PHYRM
PfkB domain-containing protein.
     
 0.905
H3GXF3_PHYRM
Uncharacterized protein.
     
 0.887
H3H550_PHYRM
Uncharacterized protein.
     
 0.887
H3G744_PHYRM
A_deaminase domain-containing protein.
     
 0.866
H3H6L0_PHYRM
AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
     
 0.866
H3G9X0_PHYRM
ADK_lid domain-containing protein; Belongs to the adenylate kinase family.
     
 0.865
H3GGY7_PHYRM
Uncharacterized protein; Belongs to the adenylate kinase family.
     
 0.865
H3GUF2_PHYRM
Uncharacterized protein.
     
 0.846
H3GIQ0_PHYRM
DUF4821 domain-containing protein.
    
  0.836
H3G6G8_PHYRM
ADK_lid domain-containing protein; Belongs to the adenylate kinase family.
     
 0.828
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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