STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GUE9_PHYRMUncharacterized protein. (558 aa)    
Predicted Functional Partners:
H3GIG7_PHYRM
Uncharacterized protein.
   
 0.792
H3GWG7_PHYRM
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
    
 0.747
H3G8U8_PHYRM
Uncharacterized protein.
    
 0.712
H3GGH8_PHYRM
FCP1 homology domain-containing protein.
    
 0.562
H3GQ39_PHYRM
FCP1 homology domain-containing protein.
    
 0.562
H3GXI3_PHYRM
Uncharacterized protein.
    
 0.562
H3GXJ8_PHYRM
FCP1 homology domain-containing protein.
    
 0.562
H3G7D6_PHYRM
Uncharacterized protein.
    
 0.435
H3GR51_PHYRM
Uncharacterized protein.
   
 0.422
H3H0P5_PHYRM
J domain-containing protein.
   
 0.422
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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