H3GV62_PHYRM protein (Phytophthora ramorum) - STRING interaction network

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Known Interactions

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Predicted Interactions

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Score

H3GV62_PHYRM

Tubulin-specific chaperone A; Belongs to the TBCA family. (103 aa)

Predicted Functional Partners:

H3G7Q3_PHYRM

0.823

H3GAD7_PHYRM

0.823

H3HAQ6_PHYRM

0.823

H3GMK1_PHYRM

0.611

H3HAV5_PHYRM

0.592

H3G7L3_PHYRM

0.581

H3HAV8_PHYRM

0.579

H3HDP0_PHYRM

0.534

H3GRS3_PHYRM

0.531

H3GH02_PHYRM

0.467

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G7L3_PHYRM	H3G7Q3_PHYRM	H3G7L3	H3G7Q3	TFCD_C domain-containing protein.	Tubulin_C domain-containing protein; Belongs to the tubulin family.	0.597
H3G7L3_PHYRM	H3GAD7_PHYRM	H3G7L3	H3GAD7	TFCD_C domain-containing protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.597
H3G7L3_PHYRM	H3GH02_PHYRM	H3G7L3	H3GH02	TFCD_C domain-containing protein.	CAP-Gly domain-containing protein.	0.590
H3G7L3_PHYRM	H3GRS3_PHYRM	H3G7L3	H3GRS3	TFCD_C domain-containing protein.	Uncharacterized protein.	0.451
H3G7L3_PHYRM	H3GV62_PHYRM	H3G7L3	H3GV62	TFCD_C domain-containing protein.	Tubulin-specific chaperone A; Belongs to the TBCA family.	0.581
H3G7L3_PHYRM	H3HAQ6_PHYRM	H3G7L3	H3HAQ6	TFCD_C domain-containing protein.	Tubulin domain-containing protein; Belongs to the tubulin family.	0.597
H3G7Q3_PHYRM	H3G7L3_PHYRM	H3G7Q3	H3G7L3	Tubulin_C domain-containing protein; Belongs to the tubulin family.	TFCD_C domain-containing protein.	0.597
H3G7Q3_PHYRM	H3GV62_PHYRM	H3G7Q3	H3GV62	Tubulin_C domain-containing protein; Belongs to the tubulin family.	Tubulin-specific chaperone A; Belongs to the TBCA family.	0.823
H3GAD7_PHYRM	H3G7L3_PHYRM	H3GAD7	H3G7L3	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	TFCD_C domain-containing protein.	0.597
H3GAD7_PHYRM	H3GV62_PHYRM	H3GAD7	H3GV62	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin-specific chaperone A; Belongs to the TBCA family.	0.823
H3GH02_PHYRM	H3G7L3_PHYRM	H3GH02	H3G7L3	CAP-Gly domain-containing protein.	TFCD_C domain-containing protein.	0.590
H3GH02_PHYRM	H3GV62_PHYRM	H3GH02	H3GV62	CAP-Gly domain-containing protein.	Tubulin-specific chaperone A; Belongs to the TBCA family.	0.467
H3GMK1_PHYRM	H3GRS3_PHYRM	H3GMK1	H3GRS3	Uncharacterized protein.	Uncharacterized protein.	0.999
H3GMK1_PHYRM	H3GV62_PHYRM	H3GMK1	H3GV62	Uncharacterized protein.	Tubulin-specific chaperone A; Belongs to the TBCA family.	0.611
H3GRS3_PHYRM	H3G7L3_PHYRM	H3GRS3	H3G7L3	Uncharacterized protein.	TFCD_C domain-containing protein.	0.451
H3GRS3_PHYRM	H3GMK1_PHYRM	H3GRS3	H3GMK1	Uncharacterized protein.	Uncharacterized protein.	0.999
H3GRS3_PHYRM	H3GV62_PHYRM	H3GRS3	H3GV62	Uncharacterized protein.	Tubulin-specific chaperone A; Belongs to the TBCA family.	0.531
H3GV62_PHYRM	H3G7L3_PHYRM	H3GV62	H3G7L3	Tubulin-specific chaperone A; Belongs to the TBCA family.	TFCD_C domain-containing protein.	0.581
H3GV62_PHYRM	H3G7Q3_PHYRM	H3GV62	H3G7Q3	Tubulin-specific chaperone A; Belongs to the TBCA family.	Tubulin_C domain-containing protein; Belongs to the tubulin family.	0.823
H3GV62_PHYRM	H3GAD7_PHYRM	H3GV62	H3GAD7	Tubulin-specific chaperone A; Belongs to the TBCA family.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.823

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Network Stats

number of nodes:

11

number of edges:

50

average node degree:

9.09

avg. local clustering coefficient:

0.923

expected number of edges:

13

PPI enrichment p-value:

1.81e-14

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006865

Amino acid transport

8 of 53

1.83

3.78

8.05e-11

GO:0006810

Transport

9 of 642

0.8

0.71

0.00015

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016597

Amino acid binding

5 of 11

2.31

3.59

6.53e-08

GO:0015276

Ligand-gated ion channel activity

3 of 11

2.09

1.6

0.00078

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0030288

Outer membrane-bounded periplasmic space

8 of 32

2.05

5.16

2.00e-13

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:4632

Bacterial extracellular solute-binding proteins, family 3, and NMT1/THI5 like

8 of 11

2.51

7.39

5.15e-16

CL:4629

Bacterial extracellular solute-binding proteins, family 3, and Arginine metabolism

9 of 19

2.33

7.18

8.61e-17

CL:4634

Bacterial extracellular solute-binding proteins, family 3

4 of 5

2.55

3.4

3.58e-07

CL:4644

Amino acid binding

3 of 5

2.43

2.17

8.15e-05

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0042597

Periplasmic space

8 of 133

1.43

2.22

1.79e-08

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF00497

Bacterial extracellular solute-binding proteins, family 3

8 of 12

2.47

7.08

1.76e-15

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR001638

Solute-binding protein family 3/N-terminal domain of MltF

9 of 17

2.37

7.37

6.74e-17

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