STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GVT6_PHYRMANK_REP_REGION domain-containing protein. (1110 aa)    
Predicted Functional Partners:
H3G7J3_PHYRM
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.757
H3HAN9_PHYRM
Protein kinase domain-containing protein.
    
 0.609
H3HCN2_PHYRM
FHA domain-containing protein.
    
  0.590
H3H2C4_PHYRM
VPS9 domain-containing protein.
    
 0.569
H3G8G7_PHYRM
Uncharacterized protein.
    
 0.524
H3G9M6_PHYRM
Uncharacterized protein.
    
 0.524
H3GVT8_PHYRM
Ubiquitin-like domain-containing protein.
 
  
 0.506
H3G7Y0_PHYRM
DPH-type MB domain-containing protein.
    
 
 0.501
H3GHW1_PHYRM
E2_bind domain-containing protein.
    
 0.491
H3GPE9_PHYRM
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
    
 0.491
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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