STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GW55_PHYRMTrehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (597 aa)    
Predicted Functional Partners:
H3G924_PHYRM
Glyco_transf_20 domain-containing protein.
 
  
  0.779
H3GYV5_PHYRM
Trehalase.
   
 0.762
H3GYW6_PHYRM
Trehalase.
   
 0.760
H3H562_PHYRM
Glyco_transf_20 domain-containing protein.
  
  
  0.736
H3GDY3_PHYRM
Glyco_transf_20 domain-containing protein.
 
  
  0.735
H3GM47_PHYRM
Uncharacterized protein.
  
  
  0.735
H3GW52_PHYRM
Uncharacterized protein.
  
  
  0.734
H3GTK8_PHYRM
Glyco_transf_20 domain-containing protein.
 
  
  0.733
H3GYW9_PHYRM
CBM20 domain-containing protein.
  
  
  0.730
H3H2B1_PHYRM
CBM20 domain-containing protein.
  
  
  0.730
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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