STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GWA7_PHYRMUncharacterized protein. (2326 aa)    
Predicted Functional Partners:
H3HBA0_PHYRM
BPL/LPL catalytic domain-containing protein.
  
 0.985
H3G8X1_PHYRM
Malate synthase; Belongs to the malate synthase family.
  
 
 0.897
H3GA27_PHYRM
Uncharacterized protein.
   
 
 0.848
H3H3C1_PHYRM
ATP-grasp domain-containing protein.
  
 
 0.836
H3G851_PHYRM
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.825
H3GBH1_PHYRM
PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.825
H3G951_PHYRM
Citrate synthase; Belongs to the citrate synthase family.
  
 0.787
H3G8E1_PHYRM
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.786
H3G968_PHYRM
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
0.785
H3GTW5_PHYRM
ATP-grasp domain-containing protein.
   
 
 0.762
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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