STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GWE7_PHYRMMFS domain-containing protein; Belongs to the STXBP/unc-18/SEC1 family. (732 aa)    
Predicted Functional Partners:
H3GYB8_PHYRM
Uncharacterized protein; Belongs to the VPS16 family.
   
 0.926
H3GBZ0_PHYRM
Pep3_Vps18 domain-containing protein.
   
 0.922
H3GIG8_PHYRM
Uncharacterized protein.
    
 0.913
H3GW62_PHYRM
Vacuolar protein sorting-associated protein 11 homolog; Belongs to the VPS11 family.
   
 0.913
H3GE71_PHYRM
CNH domain-containing protein.
   
 0.870
H3GW76_PHYRM
Vps39_1 domain-containing protein.
   
 0.870
H3GT40_PHYRM
WD_REPEATS_REGION domain-containing protein.
    
 
 0.830
H3HDG0_PHYRM
Uncharacterized protein.
    
 
 0.815
H3GAY3_PHYRM
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 
 0.799
H3GR77_PHYRM
Uncharacterized protein.
    
 
 0.754
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.