STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GWR7_PHYRMUncharacterized protein. (1010 aa)    
Predicted Functional Partners:
H3GYY6_PHYRM
Uncharacterized protein.
  
 
0.583
H3G6Z5_PHYRM
Uncharacterized protein.
  
 
0.563
H3GAM5_PHYRM
Cytosolic Fe-S cluster assembly factor NUBP1 homolog; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NUBP1-NUBP2 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP1/NBP35 subfamily.
    
 0.545
H3GKX9_PHYRM
CbiA domain-containing protein.
    
 0.545
H3GKY2_PHYRM
CbiA domain-containing protein.
    
 0.545
H3GZX4_PHYRM
Uncharacterized protein.
    
 0.545
H3H4B8_PHYRM
ABC transporter domain-containing protein.
  
 
0.460
H3G9H7_PHYRM
ABC transporter domain-containing protein.
  
 
0.437
H3H077_PHYRM
Uncharacterized protein.
  
 
0.426
H3G6P5_PHYRM
ABC transporter domain-containing protein.
  
 
0.419
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.