STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GXD8_PHYRMUncharacterized protein. (464 aa)    
Predicted Functional Partners:
H3G8V0_PHYRM
Nucleoside diphosphate kinase.
    
  0.874
H3HCR6_PHYRM
Nucleoside diphosphate kinase.
    
  0.874
H3GA16_PHYRM
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.833
H3H0N0_PHYRM
Uncharacterized protein; Belongs to the 5'-nucleotidase family.
    
  0.833
H3H1Q6_PHYRM
Uncharacterized protein; Belongs to the 5'-nucleotidase family.
    
  0.833
H3GNB4_PHYRM
DM10 domain-containing protein.
    
  0.814
H3GA88_PHYRM
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
    
  0.792
H3GGV1_PHYRM
Uncharacterized protein.
    
 0.733
H3G7N5_PHYRM
SET domain-containing protein.
    
 0.699
H3H5G1_PHYRM
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.689
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.