STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GY03_PHYRMUncharacterized protein. (1062 aa)    
Predicted Functional Partners:
H3GBN6_PHYRM
Uncharacterized protein.
     
 0.924
H3GZC5_PHYRM
Uncharacterized protein.
     
 0.912
H3H2R3_PHYRM
Uncharacterized protein.
     
 0.907
H3HC72_PHYRM
Uncharacterized protein.
   
 0.874
H3G6H5_PHYRM
Abhydrolase_2 domain-containing protein.
     
 0.867
H3G6L7_PHYRM
Abhydrolase_2 domain-containing protein.
     
 0.867
H3HDR8_PHYRM
Uncharacterized protein.
    
 0.866
H3H9Q3_PHYRM
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
    
 0.854
H3G5R2_PHYRM
Protein kinase domain-containing protein.
    
 0.845
H3G9A3_PHYRM
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.845
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.