STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3GYY0_PHYRMUncharacterized protein. (724 aa)    
Predicted Functional Partners:
H3G9T2_PHYRM
KH type-2 domain-containing protein.
    
 
 0.609
H3GDY4_PHYRM
Uncharacterized protein.
   
    0.528
H3GIY2_PHYRM
Uncharacterized protein.
   
    0.528
H3GTH9_PHYRM
RING-CH-type domain-containing protein.
    
 
 0.507
H3H5C1_PHYRM
Uncharacterized protein.
    
 
 0.505
H3GAS8_PHYRM
Ribosomal_S10 domain-containing protein.
    
 
 0.493
H3G850_PHYRM
S10_plectin domain-containing protein.
    
 
 0.484
H3GYW7_PHYRM
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.484
H3GH83_PHYRM
Uncharacterized protein.
   
 
 0.483
H3H0X3_PHYRM
Uncharacterized protein.
   
 
 0.483
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.