STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3H0Z8_PHYRMCell 5A endo-1,4-betaglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (583 aa)    
Predicted Functional Partners:
H3GMS5_PHYRM
Fn3_like domain-containing protein.
    
  0.837
H3GNN5_PHYRM
Fn3_like domain-containing protein.
    
  0.837
H3GNN6_PHYRM
Fn3_like domain-containing protein.
    
  0.837
H3GNN7_PHYRM
Fn3_like domain-containing protein.
    
  0.837
H3GNN8_PHYRM
Fn3_like domain-containing protein.
    
  0.837
CES1
Cellulose synthase 1.
    
  0.834
H3HDW3_PHYRM
Cellulose synthase 3.
    
  0.834
H3GJ22_PHYRM
Fn3_like domain-containing protein.
    
  0.829
H3GNT6_PHYRM
Fn3_like domain-containing protein.
    
  0.815
H3GER9_PHYRM
PLD phosphodiesterase domain-containing protein.
    
  0.759
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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