STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3H1E4_PHYRMLaminin IV type A domain-containing protein. (3666 aa)    
Predicted Functional Partners:
H3GZZ6_PHYRM
Uncharacterized protein.
    
 0.609
H3GHR8_PHYRM
Uncharacterized protein; Belongs to the peptidase M24B family.
    
 0.556
H3GC77_PHYRM
Uncharacterized protein.
     
 0.526
H3GG42_PHYRM
Uncharacterized protein.
     
 0.526
H3GT98_PHYRM
Uncharacterized protein.
     
 0.526
H3HD82_PHYRM
Peptidase_S9 domain-containing protein.
     
 0.503
H3GDD5_PHYRM
Uncharacterized protein.
     
 0.498
H3GEF2_PHYRM
Uncharacterized protein.
     
 0.498
H3H7F1_PHYRM
Uncharacterized protein.
     
 0.498
H3HBZ9_PHYRM
Uncharacterized protein.
     
 0.498
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.