STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3H1L0_PHYRMDeacetylase sirtuin-type domain-containing protein. (380 aa)    
Predicted Functional Partners:
H3GUE2_PHYRM
Uncharacterized protein.
  
 
 0.944
H3GLH0_PHYRM
Deacetylase sirtuin-type domain-containing protein.
  
 
0.925
H3GTB6_PHYRM
CTP_transf_like domain-containing protein.
   
 0.903
H3G891_PHYRM
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
    
 0.898
H3GR01_PHYRM
Uncharacterized protein.
    
 0.893
H3G995_PHYRM
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
 0.813
H3GH24_PHYRM
PNP_UDP_1 domain-containing protein.
    
 0.813
H3GH23_PHYRM
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
 0.754
H3H260_PHYRM
Deacetylase sirtuin-type domain-containing protein.
  
  
0.751
H3G715_PHYRM
C3H1-type domain-containing protein.
    
 0.697
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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