Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H3G889_PHYRM | H3GJ05_PHYRM | H3G889 | H3GJ05 | Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | SAM-dependent MTase TRM10-type domain-containing protein. | 0.891 |
H3G889_PHYRM | H3GLI3_PHYRM | H3G889 | H3GLI3 | Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | SAM-dependent MTase TRM10-type domain-containing protein. | 0.891 |
H3G889_PHYRM | H3H2L4_PHYRM | H3G889 | H3H2L4 | Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Uncharacterized protein. | 0.695 |
H3G8C3_PHYRM | H3GCA3_PHYRM | H3G8C3 | H3GCA3 | Ribosomal_L18_c domain-containing protein. | Uncharacterized protein. | 0.972 |
H3G8C3_PHYRM | H3H2L4_PHYRM | H3G8C3 | H3H2L4 | Ribosomal_L18_c domain-containing protein. | Uncharacterized protein. | 0.499 |
H3GCA3_PHYRM | H3G8C3_PHYRM | H3GCA3 | H3G8C3 | Uncharacterized protein. | Ribosomal_L18_c domain-containing protein. | 0.972 |
H3GCA3_PHYRM | H3GQL0_PHYRM | H3GCA3 | H3GQL0 | Uncharacterized protein. | Cyclin N-terminal domain-containing protein. | 0.814 |
H3GCA3_PHYRM | H3GT45_PHYRM | H3GCA3 | H3GT45 | Uncharacterized protein. | Uncharacterized protein. | 0.772 |
H3GCA3_PHYRM | H3H2L4_PHYRM | H3GCA3 | H3H2L4 | Uncharacterized protein. | Uncharacterized protein. | 0.502 |
H3GH19_PHYRM | H3GL41_PHYRM | H3GH19 | H3GL41 | Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. | Uncharacterized protein. | 0.999 |
H3GH19_PHYRM | H3GLG9_PHYRM | H3GH19 | H3GLG9 | Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. | Uncharacterized protein. | 0.999 |
H3GH19_PHYRM | H3H2L4_PHYRM | H3GH19 | H3H2L4 | Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. | Uncharacterized protein. | 0.855 |
H3GJ05_PHYRM | H3G889_PHYRM | H3GJ05 | H3G889 | SAM-dependent MTase TRM10-type domain-containing protein. | Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.891 |
H3GJ05_PHYRM | H3H2L4_PHYRM | H3GJ05 | H3H2L4 | SAM-dependent MTase TRM10-type domain-containing protein. | Uncharacterized protein. | 0.446 |
H3GL41_PHYRM | H3GH19_PHYRM | H3GL41 | H3GH19 | Uncharacterized protein. | Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. | 0.999 |
H3GL41_PHYRM | H3GLG9_PHYRM | H3GL41 | H3GLG9 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
H3GL41_PHYRM | H3H2L4_PHYRM | H3GL41 | H3H2L4 | Uncharacterized protein. | Uncharacterized protein. | 0.843 |
H3GLG9_PHYRM | H3GH19_PHYRM | H3GLG9 | H3GH19 | Uncharacterized protein. | Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. | 0.999 |
H3GLG9_PHYRM | H3GL41_PHYRM | H3GLG9 | H3GL41 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
H3GLG9_PHYRM | H3H2L4_PHYRM | H3GLG9 | H3H2L4 | Uncharacterized protein. | Uncharacterized protein. | 0.858 |
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