STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3H5I1_PHYRMH15 domain-containing protein. (267 aa)    
Predicted Functional Partners:
H3GRD9_PHYRM
Uncharacterized protein.
    
 0.841
H3GWG2_PHYRM
SAS-6_N domain-containing protein.
    
 0.841
H3GCM9_PHYRM
Importin N-terminal domain-containing protein.
    
   0.736
H3G5R2_PHYRM
Protein kinase domain-containing protein.
    
 0.734
H3G9A3_PHYRM
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.734
H3G9Z5_PHYRM
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.713
H3GK04_PHYRM
MULE domain-containing protein.
   
 0.713
H3GRQ6_PHYRM
Uncharacterized protein.
   
 0.713
H3GAL2_PHYRM
Histone H2A; Belongs to the histone H2A family.
   
 0.704
H3GAL3_PHYRM
Histone H2A; Belongs to the histone H2A family.
   
 0.704
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.