Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H3G9S8_PHYRM | H3G9T7_PHYRM | H3G9S8 | H3G9T7 | Uncharacterized protein. | Uncharacterized protein. | 0.431 |
H3G9S8_PHYRM | H3H6B3_PHYRM | H3G9S8 | H3H6B3 | Uncharacterized protein. | Uncharacterized protein. | 0.492 |
H3G9T7_PHYRM | H3G9S8_PHYRM | H3G9T7 | H3G9S8 | Uncharacterized protein. | Uncharacterized protein. | 0.431 |
H3G9T7_PHYRM | H3GHV1_PHYRM | H3G9T7 | H3GHV1 | Uncharacterized protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | 0.954 |
H3G9T7_PHYRM | H3GM67_PHYRM | H3G9T7 | H3GM67 | Uncharacterized protein. | CN hydrolase domain-containing protein. | 0.432 |
H3G9T7_PHYRM | H3H6B3_PHYRM | H3G9T7 | H3H6B3 | Uncharacterized protein. | Uncharacterized protein. | 0.545 |
H3GCJ1_PHYRM | H3GMB2_PHYRM | H3GCJ1 | H3GMB2 | Alpha-amylase. | Fe2OG dioxygenase domain-containing protein. | 0.597 |
H3GCJ1_PHYRM | H3GU15_PHYRM | H3GCJ1 | H3GU15 | Alpha-amylase. | Cellulase domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.597 |
H3GCJ1_PHYRM | H3H6B3_PHYRM | H3GCJ1 | H3H6B3 | Alpha-amylase. | Uncharacterized protein. | 0.610 |
H3GHV1_PHYRM | H3G9T7_PHYRM | H3GHV1 | H3G9T7 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | Uncharacterized protein. | 0.954 |
H3GHV1_PHYRM | H3H6B3_PHYRM | H3GHV1 | H3H6B3 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | Uncharacterized protein. | 0.633 |
H3GJS8_PHYRM | H3GMB2_PHYRM | H3GJS8 | H3GMB2 | Sushi domain-containing protein. | Fe2OG dioxygenase domain-containing protein. | 0.504 |
H3GJS8_PHYRM | H3GU15_PHYRM | H3GJS8 | H3GU15 | Sushi domain-containing protein. | Cellulase domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.504 |
H3GJS8_PHYRM | H3H6B3_PHYRM | H3GJS8 | H3H6B3 | Sushi domain-containing protein. | Uncharacterized protein. | 0.546 |
H3GM67_PHYRM | H3G9T7_PHYRM | H3GM67 | H3G9T7 | CN hydrolase domain-containing protein. | Uncharacterized protein. | 0.432 |
H3GM67_PHYRM | H3H6B3_PHYRM | H3GM67 | H3H6B3 | CN hydrolase domain-containing protein. | Uncharacterized protein. | 0.480 |
H3GMB2_PHYRM | H3GCJ1_PHYRM | H3GMB2 | H3GCJ1 | Fe2OG dioxygenase domain-containing protein. | Alpha-amylase. | 0.597 |
H3GMB2_PHYRM | H3GJS8_PHYRM | H3GMB2 | H3GJS8 | Fe2OG dioxygenase domain-containing protein. | Sushi domain-containing protein. | 0.504 |
H3GMB2_PHYRM | H3H6B3_PHYRM | H3GMB2 | H3H6B3 | Fe2OG dioxygenase domain-containing protein. | Uncharacterized protein. | 0.775 |
H3GMB2_PHYRM | H3H8M5_PHYRM | H3GMB2 | H3H8M5 | Fe2OG dioxygenase domain-containing protein. | Alpha-amylase. | 0.597 |
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