STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3H6B8_PHYRMJ domain-containing protein. (512 aa)    
Predicted Functional Partners:
H3G8I9_PHYRM
MPN domain-containing protein.
   
 0.972
H3G917_PHYRM
Tr-type G domain-containing protein.
   
 0.944
H3G9Y5_PHYRM
CPSF_A domain-containing protein.
   
 
 0.917
H3G535_PHYRM
Sm domain-containing protein.
   
 0.912
H3HAV5_PHYRM
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.911
H3G7Q5_PHYRM
Small nuclear ribonucleoprotein Sm D2.
   
 0.905
H3G549_PHYRM
Small nuclear ribonucleoprotein G.
   
  0.897
H3G510_PHYRM
Uncharacterized protein.
   
 0.896
H3GKT1_PHYRM
Uncharacterized protein.
   
 0.896
H3G878_PHYRM
Uncharacterized protein.
    
 0.879
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.