STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3H6U7_PHYRMPNP_UDP_1 domain-containing protein. (270 aa)    
Predicted Functional Partners:
H3GCA5_PHYRM
Aldolase_II domain-containing protein.
  
 
 0.777
H3HDQ9_PHYRM
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily.
 
 
 0.756
H3GBB8_PHYRM
Pribosyltran domain-containing protein.
  
 
 0.734
H3GAD3_PHYRM
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
  
 
 0.727
H3GHL0_PHYRM
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
 0.726
H3GY73_PHYRM
IU_nuc_hydro domain-containing protein.
   
 0.670
H3GTB6_PHYRM
CTP_transf_like domain-containing protein.
    
 0.645
H3GEP6_PHYRM
Uncharacterized protein.
  
 
 0.643
H3GNJ6_PHYRM
AB hydrolase-1 domain-containing protein.
  
 
 0.643
H3GNJ7_PHYRM
AB hydrolase-1 domain-containing protein.
  
 
 0.643
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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