STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3HA61_PHYRMProtein kinase domain-containing protein. (222 aa)    
Predicted Functional Partners:
H3G886_PHYRM
Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity.
 
 0.998
H3GE49_PHYRM
Uncharacterized protein; Belongs to the CGI121/TPRKB family.
   
 0.991
H3GSB4_PHYRM
Peptidase_M22 domain-containing protein.
   
 0.918
H3HAU0_PHYRM
WD_REPEATS_REGION domain-containing protein.
    
   0.634
H3GJN2_PHYRM
Protein kinase domain-containing protein.
  
  
 
0.543
H3G8D5_PHYRM
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
   
 
 0.540
H3HD50_PHYRM
Uncharacterized protein.
   
 
 0.540
H3GL71_PHYRM
Uncharacterized protein.
    
 0.527
H3G6M0_PHYRM
Uncharacterized protein.
    
  0.522
H3GC81_PHYRM
Uncharacterized protein.
    
  0.522
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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