STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3HA95_PHYRMPectinesterase. (275 aa)    
Predicted Functional Partners:
H3GV22_PHYRM
Uncharacterized protein.
   
  0.917
H3GC55_PHYRM
Uncharacterized protein.
    
 0.715
H3GS88_PHYRM
Uncharacterized protein.
    
 0.683
H3G5C2_PHYRM
Uncharacterized protein.
 
   
 0.661
H3GA40_PHYRM
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
   
 
 0.651
H3HDH6_PHYRM
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.624
H3GXH6_PHYRM
Uncharacterized protein.
    
 0.617
H3G538_PHYRM
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.607
H3G5A1_PHYRM
Uncharacterized protein.
   
   0.602
H3G940_PHYRM
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.592
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.