STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3HAC0_PHYRMUncharacterized protein. (705 aa)    
Predicted Functional Partners:
H3HDP0_PHYRM
Uncharacterized protein.
   
 0.743
H3GS63_PHYRM
PI3K/PI4K domain-containing protein.
    
 0.668
H3GVT8_PHYRM
Ubiquitin-like domain-containing protein.
    
 0.668
H3GE86_PHYRM
Uncharacterized protein.
    
 0.593
H3G7F3_PHYRM
SRP54 domain-containing protein.
    
 0.578
H3G8P6_PHYRM
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.574
H3GAE8_PHYRM
Uncharacterized protein.
    
 0.539
H3GB56_PHYRM
Uncharacterized protein.
    
 0.539
H3G9L9_PHYRM
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
     
 0.530
H3HAU2_PHYRM
SAC domain-containing protein.
    
 0.525
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.