STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3HAS9_PHYRMWD_REPEATS_REGION domain-containing protein. (1386 aa)    
Predicted Functional Partners:
H3GWX4_PHYRM
Uncharacterized protein.
    
 0.885
H3HB82_PHYRM
HORMA domain-containing protein.
   
 0.820
H3GJ85_PHYRM
Uncharacterized protein.
    
 0.817
H3HDX0_PHYRM
BUB1 N-terminal domain-containing protein.
   
 0.801
H3GC30_PHYRM
TFIID_20kDa domain-containing protein.
    
 0.799
H3GXH4_PHYRM
TAF domain-containing protein.
    
 0.799
H3HBI0_PHYRM
Uncharacterized protein.
    
 0.799
H3GUH2_PHYRM
CPSF_A domain-containing protein.
   
 0.798
H3GTU8_PHYRM
Uncharacterized protein.
    
 0.789
H3G5R2_PHYRM
Protein kinase domain-containing protein.
   
 0.788
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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