STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3HBZ9_PHYRMUncharacterized protein. (828 aa)    
Predicted Functional Partners:
H3G9G8_PHYRM
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
 
      0.653
H3GKY7_PHYRM
Metalloendopeptidase.
     
 0.578
H3GHR8_PHYRM
Uncharacterized protein; Belongs to the peptidase M24B family.
     
 0.563
H3G9X8_PHYRM
AMP_N domain-containing protein.
     
 0.540
H3GS31_PHYRM
AMP_N domain-containing protein.
     
 0.540
H3GVB8_PHYRM
AMP_N domain-containing protein.
     
 0.540
H3GL07_PHYRM
Metalloendopeptidase.
     
 0.536
H3HD82_PHYRM
Peptidase_S9 domain-containing protein.
     
 0.515
H3GGC9_PHYRM
EGF_2 domain-containing protein.
     
 0.507
H3GGQ8_PHYRM
Uncharacterized protein.
     
 0.507
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.