Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H3G8T1_PHYRM | H3G920_PHYRM | H3G8T1 | H3G920 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | 0.961 |
H3G8T1_PHYRM | H3GHQ9_PHYRM | H3G8T1 | H3GHQ9 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | RWD domain-containing protein; Belongs to the arginase family. | 0.445 |
H3G8T1_PHYRM | H3GTB6_PHYRM | H3G8T1 | H3GTB6 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | CTP_transf_like domain-containing protein. | 0.941 |
H3G8T1_PHYRM | H3HC30_PHYRM | H3G8T1 | H3HC30 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | Uncharacterized protein. | 0.643 |
H3G920_PHYRM | H3G8T1_PHYRM | H3G920 | H3G8T1 | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | 0.961 |
H3G920_PHYRM | H3GLH0_PHYRM | H3G920 | H3GLH0 | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | Deacetylase sirtuin-type domain-containing protein. | 0.676 |
H3G920_PHYRM | H3GTB6_PHYRM | H3G920 | H3GTB6 | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | CTP_transf_like domain-containing protein. | 0.943 |
H3G920_PHYRM | H3GUE2_PHYRM | H3G920 | H3GUE2 | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | Uncharacterized protein. | 0.676 |
H3G920_PHYRM | H3HC30_PHYRM | H3G920 | H3HC30 | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | Uncharacterized protein. | 0.705 |
H3G9T7_PHYRM | H3GAR3_PHYRM | H3G9T7 | H3GAR3 | Uncharacterized protein. | Glutamine amidotransferase type-1 domain-containing protein. | 0.999 |
H3G9T7_PHYRM | H3GTD3_PHYRM | H3G9T7 | H3GTD3 | Uncharacterized protein. | Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.482 |
H3G9T7_PHYRM | H3HC30_PHYRM | H3G9T7 | H3HC30 | Uncharacterized protein. | Uncharacterized protein. | 0.601 |
H3GAR3_PHYRM | H3G9T7_PHYRM | H3GAR3 | H3G9T7 | Glutamine amidotransferase type-1 domain-containing protein. | Uncharacterized protein. | 0.999 |
H3GAR3_PHYRM | H3HC30_PHYRM | H3GAR3 | H3HC30 | Glutamine amidotransferase type-1 domain-containing protein. | Uncharacterized protein. | 0.591 |
H3GC62_PHYRM | H3HC30_PHYRM | H3GC62 | H3HC30 | Uncharacterized protein. | Uncharacterized protein. | 0.641 |
H3GHQ9_PHYRM | H3G8T1_PHYRM | H3GHQ9 | H3G8T1 | RWD domain-containing protein; Belongs to the arginase family. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | 0.445 |
H3GHQ9_PHYRM | H3HC30_PHYRM | H3GHQ9 | H3HC30 | RWD domain-containing protein; Belongs to the arginase family. | Uncharacterized protein. | 0.620 |
H3GLH0_PHYRM | H3G920_PHYRM | H3GLH0 | H3G920 | Deacetylase sirtuin-type domain-containing protein. | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | 0.676 |
H3GLH0_PHYRM | H3GTB6_PHYRM | H3GLH0 | H3GTB6 | Deacetylase sirtuin-type domain-containing protein. | CTP_transf_like domain-containing protein. | 0.937 |
H3GLH0_PHYRM | H3GUE2_PHYRM | H3GLH0 | H3GUE2 | Deacetylase sirtuin-type domain-containing protein. | Uncharacterized protein. | 0.915 |
page 1 of 3