STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3HC30_PHYRMUncharacterized protein. (544 aa)    
Predicted Functional Partners:
H3G920_PHYRM
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
  
 
 0.705
H3GTB6_PHYRM
CTP_transf_like domain-containing protein.
    
 0.690
H3G8T1_PHYRM
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family.
   
 0.643
H3GC62_PHYRM
Uncharacterized protein.
  
 
  0.641
H3GHQ9_PHYRM
RWD domain-containing protein; Belongs to the arginase family.
    
 0.620
H3GLH0_PHYRM
Deacetylase sirtuin-type domain-containing protein.
    
 0.609
H3GUE2_PHYRM
Uncharacterized protein.
    
 0.609
H3G9T7_PHYRM
Uncharacterized protein.
  
 
 0.601
H3GTD3_PHYRM
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.596
H3GAR3_PHYRM
Glutamine amidotransferase type-1 domain-containing protein.
    
 0.591
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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