STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3HCM4_PHYRMUncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family. (108 aa)    
Predicted Functional Partners:
H3G6K1_PHYRM
Uncharacterized protein.
   
 0.999
H3HEB7_PHYRM
Uncharacterized protein.
   
 0.999
H3GII1_PHYRM
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.998
H3GMQ7_PHYRM
Uncharacterized protein.
   
 0.997
H3G7D8_PHYRM
Cytochrome c domain-containing protein.
   
 0.996
H3G847_PHYRM
Uncharacterized protein; Belongs to the peptidase M16 family.
   
 0.995
H3GXC6_PHYRM
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 
 0.983
H3GH69_PHYRM
Uncharacterized protein.
   
 
 0.982
H3G5I4_PHYRM
UCR_hinge domain-containing protein.
   
 0.981
H3H0X0_PHYRM
zf-CHCC domain-containing protein.
   
 
 0.980
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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