STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3HCT5_PHYRMHECT domain-containing protein. (566 aa)    
Predicted Functional Partners:
H3GJ83_PHYRM
Uncharacterized protein.
 
      0.900
H3H2V0_PHYRM
BTB domain-containing protein.
 
      0.899
H3GHP8_PHYRM
Uncharacterized protein.
 
      0.897
H3HCT4_PHYRM
Uncharacterized protein.
 
   
  0.872
H3H1T1_PHYRM
Uncharacterized protein.
 
   
  0.758
H3G7J3_PHYRM
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.757
H3GK00_PHYRM
Uncharacterized protein.
 
   
  0.685
H3HAN9_PHYRM
Protein kinase domain-containing protein.
    
 0.609
H3HCN2_PHYRM
FHA domain-containing protein.
    
  0.590
H3H2C4_PHYRM
VPS9 domain-containing protein.
    
 0.569
Your Current Organism:
Phytophthora ramorum
NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death
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