STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JGI1_00405Unannotated protein; Belongs to the anti-sigma-factor antagonist family. (118 aa)    
Predicted Functional Partners:
JGI1_00930
Unannotated protein.
 
 0.979
JGI1_00496
Unannotated protein.
 
 0.971
JGI1_00302
Unannotated protein.
  
 
 0.969
JGI1_00351
Unannotated protein.
 
 0.966
JGI1_00497
Unannotated protein.
 
 0.965
JGI1_00494
Unannotated protein.
 
 0.951
JGI1_00356
Unannotated protein.
 
 0.950
JGI1_01391
Unannotated protein.
  
 
 0.830
JGI1_01590
Unannotated protein.
  
 
 0.809
JGI1_00280
Unannotated protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.807
Your Current Organism:
Thermokryptus mobilis
NCBI taxonomy Id: 1643428
Other names: C. Thermokryptus mobilis, Candidatus Thermokryptus mobilis, bacterium JGI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.