STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JGI1_01006Unannotated protein. (257 aa)    
Predicted Functional Partners:
JGI1_00828
Unannotated protein.
  
 0.832
JGI1_01007
Unannotated protein.
 
     0.815
JGI1_01005
Unannotated protein.
 
    0.801
JGI1_01008
Unannotated protein.
       0.773
JGI1_01009
Unannotated protein.
       0.773
JGI1_01894
Unannotated protein.
 
 
 0.772
JGI1_01012
Unannotated protein.
 
     0.767
JGI1_01010
Unannotated protein; Belongs to the CDS family.
       0.734
JGI1_01245
Unannotated protein.
  
 0.711
rimO
Unannotated protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
       0.689
Your Current Organism:
Thermokryptus mobilis
NCBI taxonomy Id: 1643428
Other names: C. Thermokryptus mobilis, Candidatus Thermokryptus mobilis, bacterium JGI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.