STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JGI1_01777Unannotated protein; Belongs to the N(4)/N(6)-methyltransferase family. (271 aa)    
Predicted Functional Partners:
serS
Unannotated protein; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
       0.746
JGI1_01778
Unannotated protein.
       0.727
JGI1_01474
Unannotated protein.
  
     0.702
JGI1_01773
Unannotated protein.
       0.681
JGI1_01774
Unannotated protein.
       0.681
JGI1_01775
Unannotated protein.
       0.681
JGI1_01779
Unannotated protein.
       0.676
JGI1_01772
Unannotated protein.
       0.597
JGI1_01771
Unannotated protein.
       0.581
JGI1_01780
Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
       0.565
Your Current Organism:
Thermokryptus mobilis
NCBI taxonomy Id: 1643428
Other names: C. Thermokryptus mobilis, Candidatus Thermokryptus mobilis, bacterium JGI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.