STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TonBFerric siderophore transport system, periplasmic binding protein TonB; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)    
Predicted Functional Partners:
ExbD
Biopolymer transport protein ExbD/TolR; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.959
AKR54563.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.930
AKR54564.1
TonB-dependent hemin, ferrichrome receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.929
ExbB
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.898
AKR54569.1
ABC-type hemin transport system, ATPase component; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.798
AKR55351.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.785
AKR54567.1
Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.775
HmuS
Hemin transport protein HmuS; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.721
AKR54568.1
Hemin ABC transporter, permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.642
AKR55558.1
Outer membrane protein Omp31 precursor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.609
Your Current Organism:
Devosia sp. H5989
NCBI taxonomy Id: 1643450
Other names: D. sp. H5989
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.