STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOR29752.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (120 aa)    
Predicted Functional Partners:
AOR29753.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.877
AOR36949.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.539
AOR34167.1
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.539
AOR36662.1
Ester cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.503
AOR29866.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.479
AOR29732.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.478
AOR29869.1
IS5 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.476
BFF78_00830
MerR family transcriptional regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.473
AOR35767.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.473
AOR29920.1
IS5 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.443
Your Current Organism:
Streptomyces puniciscabiei
NCBI taxonomy Id: 164348
Other names: KACC 20253, LMG 21391, LMG:21391, S. puniciscabiei, Streptomyces puniciscabiei Park et al. 2003, Streptomyces sp. S77, strain S77
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.