STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOR30736.1Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)    
Predicted Functional Partners:
AOR30737.1
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.969
AOR36588.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.928
AOR34203.1
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.926
AOR30739.1
Nucleotide sugar-1-phosphate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.898
AOR30740.1
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.873
AOR30738.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.871
AOR30735.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.851
AOR33923.1
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.779
BFF78_06445
Squalene synthase HpnC; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.766
AOR30742.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.647
Your Current Organism:
Streptomyces puniciscabiei
NCBI taxonomy Id: 164348
Other names: KACC 20253, LMG 21391, LMG:21391, S. puniciscabiei, Streptomyces puniciscabiei Park et al. 2003, Streptomyces sp. S77, strain S77
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