STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOR32290.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (767 aa)    
Predicted Functional Partners:
AOR35985.1
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 
 0.859
AOR35984.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.832
AOR37570.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.789
AOR32289.1
GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.783
AOR32217.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
  
 
 0.767
AOR32291.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.738
AOR32270.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.727
AOR32271.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.725
AOR32292.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.725
AOR32218.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.721
Your Current Organism:
Streptomyces puniciscabiei
NCBI taxonomy Id: 164348
Other names: KACC 20253, LMG 21391, LMG:21391, S. puniciscabiei, Streptomyces puniciscabiei Park et al. 2003, Streptomyces sp. S77, strain S77
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