STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOR34267.1Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)    
Predicted Functional Partners:
AOR36531.1
Sarcosine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.
   
  0.774
AOR35079.1
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.667
gcvP
Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.646
AOR36817.1
Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.590
AOR30090.1
Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.590
AOR30452.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.590
AOR31603.1
Polynucleotide kinase-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.590
AOR31973.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.590
AOR33752.1
Arsenite S-adenosylmethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.489
BFF78_27300
methylmalonyl-CoA carboxyltransferase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.449
Your Current Organism:
Streptomyces puniciscabiei
NCBI taxonomy Id: 164348
Other names: KACC 20253, LMG 21391, LMG:21391, S. puniciscabiei, Streptomyces puniciscabiei Park et al. 2003, Streptomyces sp. S77, strain S77
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