STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001657325_03088Unannotated protein. (216 aa)    
Predicted Functional Partners:
GCA_001657325_03087
Unannotated protein.
 
 0.984
GCA_001657325_00125
Unannotated protein.
 
 0.971
GCA_001657325_04044
Unannotated protein.
 
 0.936
GCA_001657325_04043
Unannotated protein.
 
 0.932
GCA_001657325_03072
Unannotated protein.
 
 
 0.800
GCA_001657325_04460
Unannotated protein.
 
  
 0.750
GCA_001657325_01534
Unannotated protein.
  
   
 0.619
GCA_001657325_01076
Unannotated protein.
  
     0.618
GCA_001657325_02445
Unannotated protein.
  
   
 0.605
GCA_001657325_04509
Unannotated protein.
  
     0.596
Your Current Organism:
Geitlerinema sp. BBD19919
NCBI taxonomy Id: 1643526
Other names: G. sp. BBD 1991-9, Geitlerinema sp. BBD 1991-9
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.