STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001657325_04450Unannotated protein. (541 aa)    
Predicted Functional Partners:
GCA_001657325_02101
Unannotated protein.
  
 
 0.991
GCA_001657325_01340
Unannotated protein.
  
 
 0.910
GCA_001657325_00069
Unannotated protein.
    
 0.896
GCA_001657325_02893
Unannotated protein.
     
 0.869
GCA_001657325_01579
Unannotated protein.
  
 0.848
GCA_001657325_03391
Unannotated protein.
 
 0.831
GCA_001657325_04174
Unannotated protein.
 
 
 0.818
GCA_001657325_03700
Unannotated protein.
     
 0.811
GCA_001657325_01066
Unannotated protein.
  
 
 0.810
GCA_001657325_03458
Unannotated protein.
    
  0.806
Your Current Organism:
Geitlerinema sp. BBD19919
NCBI taxonomy Id: 1643526
Other names: G. sp. BBD 1991-9, Geitlerinema sp. BBD 1991-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.